BMRB Entry 7019
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7019
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Title: NMR assignment of the protein nsp3a from SARS-CoV PubMed: 16799860
Deposition date: 2006-03-10 Original release date: 2007-02-14
Authors: Serrano, Pedro; Almeida, Marcius; Johnson, Margaret; Saikatendu, Kumar; Subramanian, Vanita; Joseph, Jeremiah; Stevens, Raymond; Kuhn, Peter; Wuthrich, Kurt
Citation: Serrano, Pedro; Almeida, Marcius; Johnson, Margaret; Wuthrich, Kurt. "NMR assignment of the protein nsp3a from SARS-CoV" J. Biomol. NMR 36, 45-45 (2006).
Assembly members:
nsp3a, polymer, 112 residues, Formula weight is not available
Natural source: Common Name: SARS-CoV Taxonomy ID: 227859 Superkingdom: Viruses Kingdom: not available Genus/species: Coronavirus SARS
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
nsp3a: APIKGVTFGEDTVWEVQGYK
NVRITFELDERVDKVLNEKC
SVYTVESGTEVTEFACVVAE
AVVKTLQPVSDLLTNMGIDL
DEWSVATFYLFDDAGEENFS
SRMYCSFYPPDE
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 496 |
| 15N chemical shifts | 117 |
| 1H chemical shifts | 773 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | nsp3a | 1 |
Entities:
Entity 1, nsp3a 112 residues - Formula weight is not available
| 1 | ALA | PRO | ILE | LYS | GLY | VAL | THR | PHE | GLY | GLU | ||||
| 2 | ASP | THR | VAL | TRP | GLU | VAL | GLN | GLY | TYR | LYS | ||||
| 3 | ASN | VAL | ARG | ILE | THR | PHE | GLU | LEU | ASP | GLU | ||||
| 4 | ARG | VAL | ASP | LYS | VAL | LEU | ASN | GLU | LYS | CYS | ||||
| 5 | SER | VAL | TYR | THR | VAL | GLU | SER | GLY | THR | GLU | ||||
| 6 | VAL | THR | GLU | PHE | ALA | CYS | VAL | VAL | ALA | GLU | ||||
| 7 | ALA | VAL | VAL | LYS | THR | LEU | GLN | PRO | VAL | SER | ||||
| 8 | ASP | LEU | LEU | THR | ASN | MET | GLY | ILE | ASP | LEU | ||||
| 9 | ASP | GLU | TRP | SER | VAL | ALA | THR | PHE | TYR | LEU | ||||
| 10 | PHE | ASP | ASP | ALA | GLY | GLU | GLU | ASN | PHE | SER | ||||
| 11 | SER | ARG | MET | TYR | CYS | SER | PHE | TYR | PRO | PRO | ||||
| 12 | ASP | GLU |
Samples:
sample_1: nsp3a, [U-13C; U-15N], 1 – 2.5 mM; sodium phosphate 50 mM; NaCl 150 mM
conditions_1: pH: 6.5
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 15N H-HSQC | sample_1 | not available | conditions_1 |
| 13C H-HSQC | sample_1 | not available | conditions_1 |
| 3D HNCACB | sample_1 | not available | conditions_1 |
| 3D HNCA | sample_1 | not available | conditions_1 |
| 3D CACBCONH | sample_1 | not available | conditions_1 |
| 3D HNCO | sample_1 | not available | conditions_1 |
| 3D HCCH-TOCSY | sample_1 | not available | conditions_1 |
Software:
No software information available
NMR spectrometers:
- Bruker DRX 700 MHz
Related Database Links:
| PDB | |
| DBJ | BAC81346 BAC81347 BAC81360 BAC81361 BAC81374 |
| GB | AAP13439 AAP13442 AAP13566 AAP13575 AAP30028 |
| REF | NP_828849 NP_828850 NP_828862 |
| SP | P0C6U8 P0C6X7 |
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