BMRB Entry 5499
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5499
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: The PDZ7 of Glutamate Receptor Interacting Protein Binds to its Target via a Novel Hydrophobic Surface Area PubMed: 12196542
Deposition date: 2002-08-13 Original release date: 2003-02-20
Authors: Feng, Wei; Fan, Jing-Song; Jiang, Ming; Shi, Ya-Wei; Zhang, Mingjie
Citation: Feng, Wei; Fan, Jing-Song; Jiang, Ming; Shi, Ya-Wei; Zhang, Mingjie. "PDZ7 of Glutamate Receptor Interacting Protein Binds to its Target via a Novel Hydrophobic Surface Area" J. Biol. Chem. 277, 41140-41146 (2002).
Assembly members:
the seventh PDZ domain of Glutamate Receptor Interacting Protein 1, polymer, 91 residues, Formula weight is not available
Natural source: Common Name: Norway rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
the seventh PDZ domain of Glutamate Receptor Interacting Protein 1: SPTPVELHKVTLYKDSGMED
FGFSVADGLLEKGVYVKNIR
PAGPGDLGGLKPYDRLLQVN
HVRTRDFDCCLVVPLIAESG
NKLDLVISRNP
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 584 |
| 13C chemical shifts | 369 |
| 15N chemical shifts | 84 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | AMPA receptor interacting protein | 1 |
Entities:
Entity 1, AMPA receptor interacting protein 91 residues - Formula weight is not available
| 1 | SER | PRO | THR | PRO | VAL | GLU | LEU | HIS | LYS | VAL | ||||
| 2 | THR | LEU | TYR | LYS | ASP | SER | GLY | MET | GLU | ASP | ||||
| 3 | PHE | GLY | PHE | SER | VAL | ALA | ASP | GLY | LEU | LEU | ||||
| 4 | GLU | LYS | GLY | VAL | TYR | VAL | LYS | ASN | ILE | ARG | ||||
| 5 | PRO | ALA | GLY | PRO | GLY | ASP | LEU | GLY | GLY | LEU | ||||
| 6 | LYS | PRO | TYR | ASP | ARG | LEU | LEU | GLN | VAL | ASN | ||||
| 7 | HIS | VAL | ARG | THR | ARG | ASP | PHE | ASP | CYS | CYS | ||||
| 8 | LEU | VAL | VAL | PRO | LEU | ILE | ALA | GLU | SER | GLY | ||||
| 9 | ASN | LYS | LEU | ASP | LEU | VAL | ILE | SER | ARG | ASN | ||||
| 10 | PRO |
Samples:
sample_1: the seventh PDZ domain of Glutamate Receptor Interacting Protein 1 1.0 mM; D2O 99.9%; potassium phosphate buffer 100 mM
sample_2: the seventh PDZ domain of Glutamate Receptor Interacting Protein 1, [U-100% 15N], 1 mM; H2O 90%; D20 10%; potassium phosphate buffer 100 mM
sample_3: the seventh PDZ domain of Glutamate Receptor Interacting Protein 1, [U-100% 15N;U-100% 13C], 1.0 mM; D2O 99.9%; potassium phosphate buffer 100 mM
sample_4: the seventh PDZ domain of Glutamate Receptor Interacting Protein 1, [U-100% 15N; U-100% 13C], 1.0 mM; H2O 90%; D2O 10%; potassium phosphate buffer 100 mM
sample_cond_1: pH: 6.5 na; temperature: 298 K; ionic strength: 100 mM; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | not available | not available | not available |
| 3D 15N-separated_NOESY | not available | not available | not available |
| 3D 13C-separated_NOESY | not available | not available | not available |
Software:
CNS v1.1 - structure solution
NMR spectrometers:
- Varian INOVA 750 MHz
Related Database Links:
| PDB | |
| DBJ | BAC26668 |
| EMBL | CAB39895 |
| GB | AAP81257 AAQ56581 AAR08916 ABB46288 EDL24394 |
| REF | NP_001264224 XP_002687693 XP_004007495 XP_004330097 XP_005962414 |
| TPG | DAA29720 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts