BMRB Entry 4655
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4655
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Title: Solution Structure of Intradiskal Loop 1 of Bovine Rhodopsin (Rhodopsin Residues 93-123) PubMed: 10888202
Deposition date: 2000-01-28 Original release date: 2001-05-10
Authors: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.
Citation: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.; Kuzmanovski, G.; Alderfer, J.; Albert, A.. "Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin" J. Pept. Res. 55, 455-465 (2000).
Assembly members:
RHODOPSIN, polymer, 31 residues, Formula weight is not available
Natural source: Common Name: cow Taxonomy ID: 9913 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Bos taurus
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
RHODOPSIN: TTLYTSLHGYFVFGPTGCNL
EGFFATLGGEI
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 157 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | RHODOPSIN | 1 |
Entities:
Entity 1, RHODOPSIN 31 residues - Formula weight is not available
| 1 | THR | THR | LEU | TYR | THR | SER | LEU | HIS | GLY | TYR | ||||
| 2 | PHE | VAL | PHE | GLY | PRO | THR | GLY | CYS | ASN | LEU | ||||
| 3 | GLU | GLY | PHE | PHE | ALA | THR | LEU | GLY | GLY | GLU | ||||
| 4 | ILE |
Samples:
sample_1: RHODOPSIN 2 mM; DMSO%
sample_cond_1: temperature: 303 K; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | sample_1 | not available | sample_cond_1 |
| DQF-COSY | sample_1 | not available | sample_cond_1 |
Software:
FELIX - data analysis
DIANA - refinement
NMR spectrometers:
- Bruker AMX 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAB83621 BAC31871 BAC31908 BAD02408 BAD02410 |
| EMBL | CAA43398 CAA87081 CAD10144 |
| GB | AAA30674 AAA30675 AAA39861 AAA63392 AAA84439 |
| PRF | 0811197A 0901188A 0901212A 1001148A |
| REF | NP_001009242 NP_001014890 NP_001231336 NP_254276 NP_663358 |
| SP | O18766 O62794 O62795 P02699 P02700 |
| TPG | DAA16827 |