BMRB Entry 10036
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10036
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Title: Solution structure of mouse CGI-38 protein
Deposition date: 2006-11-01 Original release date: 2008-08-13
Authors: Kobayashi, N.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.
Citation: Kobayashi, N.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.. "Solution structure of mouse CGI-38 protein" . ., .-..
Assembly members:
Protein CGI-38, polymer, 151 residues, Formula weight is not available
Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: cell free synthesis
Entity Sequences (FASTA):
Protein CGI-38: GSSGSSGMAASTDIAGLEES
FRKFAIHGDPKASGQEMNGK
NWAKLCKDCKVADGKAVTGT
DVDIVFSKVKAKSARVINYE
EFKKALEELATKRFKGKSKE
EAFDAICQLIAGKEPANIGV
TKAKTGGAVDRLTDTSKYTG
SHKERSGPSSG
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 629 |
| 15N chemical shifts | 154 |
| 1H chemical shifts | 983 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Protein CGI-38 | 1 |
Entities:
Entity 1, Protein CGI-38 151 residues - Formula weight is not available
| 1 | GLY | SER | SER | GLY | SER | SER | GLY | MET | ALA | ALA | ||||
| 2 | SER | THR | ASP | ILE | ALA | GLY | LEU | GLU | GLU | SER | ||||
| 3 | PHE | ARG | LYS | PHE | ALA | ILE | HIS | GLY | ASP | PRO | ||||
| 4 | LYS | ALA | SER | GLY | GLN | GLU | MET | ASN | GLY | LYS | ||||
| 5 | ASN | TRP | ALA | LYS | LEU | CYS | LYS | ASP | CYS | LYS | ||||
| 6 | VAL | ALA | ASP | GLY | LYS | ALA | VAL | THR | GLY | THR | ||||
| 7 | ASP | VAL | ASP | ILE | VAL | PHE | SER | LYS | VAL | LYS | ||||
| 8 | ALA | LYS | SER | ALA | ARG | VAL | ILE | ASN | TYR | GLU | ||||
| 9 | GLU | PHE | LYS | LYS | ALA | LEU | GLU | GLU | LEU | ALA | ||||
| 10 | THR | LYS | ARG | PHE | LYS | GLY | LYS | SER | LYS | GLU | ||||
| 11 | GLU | ALA | PHE | ASP | ALA | ILE | CYS | GLN | LEU | ILE | ||||
| 12 | ALA | GLY | LYS | GLU | PRO | ALA | ASN | ILE | GLY | VAL | ||||
| 13 | THR | LYS | ALA | LYS | THR | GLY | GLY | ALA | VAL | ASP | ||||
| 14 | ARG | LEU | THR | ASP | THR | SER | LYS | TYR | THR | GLY | ||||
| 15 | SER | HIS | LYS | GLU | ARG | SER | GLY | PRO | SER | SER | ||||
| 16 | GLY |
Samples:
sample_1: CGI-38, [U-13C; U-15N], 1.23 mM; Phosphate 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%
condition_1: ionic strength: 120 mM; pH: 6.0; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D 15N-separated NOESY | sample_1 | not available | condition_1 |
| 3D 13C-separated NOESY | sample_1 | not available | condition_1 |
Software:
xwinnmr v2.6, Bruker - collection
NMRPipe v20020425, Delaglio, F. - processing
NMRView v5.0.4, Johnson, B. A. - data analysis
Kujira v0.902, Kobayashi, N. - data analysis
CYANA v1.0.7, Guntert, P. - refinement, structure solution
NMR spectrometers:
- Bruker AVANCE 800 MHz
Related Database Links:
| PDB | |
| DBJ | BAB26493 BAB28237 BAE32991 BAE35831 |
| GB | AAH10788 AAH87585 EDL11282 EDL92377 EGV97042 |
| REF | NP_001009639 NP_001181772 NP_080757 XP_002802578 XP_003262934 |
| SP | Q5PPN5 Q9CRB6 |
Download simulated HSQC data in one of the following formats:
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