BMRB Entry 5876

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5876

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Complete backbone resonance assignments of p47: the 41kDa adaptor protein of the AAA ATPase p97 PubMed: 14752269

Deposition date: 2003-07-18 Original release date: 2003-12-05

Authors: Yuan, Xuemei; Simpson, Pete; Kondo, Hisao; Mckeown, Ciaran; Dreveny, Ingrid; Shaw, Anthony; Zhang, Xiaodong; Freemont, Paul; Matthews, Stephen

Citation: Yuan, Xuemei; Simpson, Pete; Kondo, Hisao; Mckeown, Ciaran; Dreveny, Ingrid; Zhang, Xiaodong; Freemont, Paul; Matthews, Stephen. "Letter to the Editor: Complete backbone resonance assignments of p47: the 41kDa adaptor protein of the AAA ATPase p97" J. Biomol. NMR 28, 309-310 (2004).

Assembly members:
p47, polymer, 200 residues, Formula weight is not available

Natural source: Common Name: Norway rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):
p47: ERRRHSGQDVHVVLKLWKTG FSLDNGDLRSYQDPSNAQFL ESIRRGEVPAELRRLAHGGQ VNLDMEDHRDEDFVKPKGAF KAFTGEGQKLGSTAPQVLNT SSPAQQAENEAKASSSILIN EAEPTTNIQIRLADGGRLVQ KFNHSHRISDIRLFIVDARP AMAATSFVLMTTFPNKELAD ENQTLKEANLLNAVIVQRLT

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	1205
13C chemical shifts	563
15N chemical shifts	182

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	p47 residues 171-370, p47 monomer	1

Entities:

Entity 1, p47 residues 171-370, p47 monomer 200 residues - Formula weight is not available

1	GLU	ARG	ARG	ARG	HIS	SER	GLY	GLN	ASP	VAL
2	HIS	VAL	VAL	LEU	LYS	LEU	TRP	LYS	THR	GLY
3	PHE	SER	LEU	ASP	ASN	GLY	ASP	LEU	ARG	SER
4	TYR	GLN	ASP	PRO	SER	ASN	ALA	GLN	PHE	LEU
5	GLU	SER	ILE	ARG	ARG	GLY	GLU	VAL	PRO	ALA
6	GLU	LEU	ARG	ARG	LEU	ALA	HIS	GLY	GLY	GLN
7	VAL	ASN	LEU	ASP	MET	GLU	ASP	HIS	ARG	ASP
8	GLU	ASP	PHE	VAL	LYS	PRO	LYS	GLY	ALA	PHE
9	LYS	ALA	PHE	THR	GLY	GLU	GLY	GLN	LYS	LEU
10	GLY	SER	THR	ALA	PRO	GLN	VAL	LEU	ASN	THR
11	SER	SER	PRO	ALA	GLN	GLN	ALA	GLU	ASN	GLU
12	ALA	LYS	ALA	SER	SER	SER	ILE	LEU	ILE	ASN
13	GLU	ALA	GLU	PRO	THR	THR	ASN	ILE	GLN	ILE
14	ARG	LEU	ALA	ASP	GLY	GLY	ARG	LEU	VAL	GLN
15	LYS	PHE	ASN	HIS	SER	HIS	ARG	ILE	SER	ASP
16	ILE	ARG	LEU	PHE	ILE	VAL	ASP	ALA	ARG	PRO
17	ALA	MET	ALA	ALA	THR	SER	PHE	VAL	LEU	MET
18	THR	THR	PHE	PRO	ASN	LYS	GLU	LEU	ALA	ASP
19	GLU	ASN	GLN	THR	LEU	LYS	GLU	ALA	ASN	LEU
20	LEU	ASN	ALA	VAL	ILE	VAL	GLN	ARG	LEU	THR

Samples:

sample_1: p47, [U-13C; U-15N], 0.5 mM

ex-cond: pH: 5.3; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCO	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HNCACB	not available	not available	not available
HBHA(CBCACO)NH	not available	not available	not available
1H-15N NOESY	not available	not available	not available
1H-13C NOESY	not available	not available	not available

Software:

NMRPipe -

NMRView -

NMR spectrometers:

Bruker DRX 500 MHz
Varian . 800 MHz

PDB	1S3S
DBJ	BAA21659 BAB28604 BAE23234
EMBL	CAA71742
GB	AAH50936 AAH72464 AAI02957 AAI06102 EDL05910
REF	NP_001029729 NP_001278003 NP_114187 NP_938085 XP_003411671
SP	O35987 Q3SZC4 Q9CZ44
TPG	DAA23261

Biological Magnetic Resonance Data Bank