BMRB Entry 5018
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5018
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Title: Solution Structure of the Tumor Necrosis Factor Receptor-1 Death Domain PubMed: 11453696
Deposition date: 2001-05-21 Original release date: 2002-05-09
Authors: Sukits, S.; Lin, L.-L.; Hsu, S.; Malakian, K.; Powers, R.; Xu, G.-Y.
Citation: Sukits, S.; Lin, L.-L.; Hsu, S.; Malakian, K.; Powers, R.; Xu, G.-Y.. "Solution Structure of the Tumor Necrosis Factor Receptor-1 Death Domain" J. Mol. Biol. 310, 895-906 (2001).
Assembly members:
Tumor Necrosis Factor Receptor-1, polymer, 112 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Tumor Necrosis Factor Receptor-1: MAHKPQSLDTDDPATLYAVV
ENVPPLRWKEFVKRLGLSDH
EIDRLELQNGRCLREAQYSM
LATWRRRTPRREATLELLGR
VLRDMDLLGCLEDIEEALCG
PAALPPAPSLLR
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 573 |
| 13C chemical shifts | 431 |
| 15N chemical shifts | 98 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | TUMOR NECROSIS FACTOR RECEPTOR-1 | 1 |
Entities:
Entity 1, TUMOR NECROSIS FACTOR RECEPTOR-1 112 residues - Formula weight is not available
| 1 | MET | ALA | HIS | LYS | PRO | GLN | SER | LEU | ASP | THR | ||||
| 2 | ASP | ASP | PRO | ALA | THR | LEU | TYR | ALA | VAL | VAL | ||||
| 3 | GLU | ASN | VAL | PRO | PRO | LEU | ARG | TRP | LYS | GLU | ||||
| 4 | PHE | VAL | LYS | ARG | LEU | GLY | LEU | SER | ASP | HIS | ||||
| 5 | GLU | ILE | ASP | ARG | LEU | GLU | LEU | GLN | ASN | GLY | ||||
| 6 | ARG | CYS | LEU | ARG | GLU | ALA | GLN | TYR | SER | MET | ||||
| 7 | LEU | ALA | THR | TRP | ARG | ARG | ARG | THR | PRO | ARG | ||||
| 8 | ARG | GLU | ALA | THR | LEU | GLU | LEU | LEU | GLY | ARG | ||||
| 9 | VAL | LEU | ARG | ASP | MET | ASP | LEU | LEU | GLY | CYS | ||||
| 10 | LEU | GLU | ASP | ILE | GLU | GLU | ALA | LEU | CYS | GLY | ||||
| 11 | PRO | ALA | ALA | LEU | PRO | PRO | ALA | PRO | SER | LEU | ||||
| 12 | LEU | ARG |
Samples:
sample_1: Tumor Necrosis Factor Receptor-1 1 mM; sodium acetate 10 mM; DTT 10 mM
sample_cond_1: pH: 4.0; temperature: 308 K; ionic strength: 10 mM; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D 15N-separated NOESY | not available | not available | not available |
| 3D 13C-separated NOESY | not available | not available | not available |
| 4D 13C-separated NOESY | not available | not available | not available |
Software:
X-PLOR v9.8 - structure solution
NMRPipe v1.8 - processing
pipp v4.2.2 - data analysis
NMR spectrometers:
- Varian UNITYplus 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAF83777 BAG37891 BAG51763 BAG60879 BAG65321 |
| EMBL | CAA39021 |
| GB | AAA03210 AAA36753 AAA36754 AAA36756 AAA61201 |
| REF | NP_001056 XP_002822854 XP_004052596 XP_007965520 XP_008971992 |
| SP | P19438 |
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