BMRB Entry 17406
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR17406
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Title: Structure of a 4X4 Nucleotide RNA Internal Loop from an R2 Retrotransposon PubMed: 21778280
Deposition date: 2011-01-11 Original release date: 2011-08-17
Authors: Lerman, Yelena; Kennedy, Scott; Turner, Douglas
Citation: Lerman, Yelena; Kennedy, Scott; Shankar, Neelaabh; Parisien, Marc; Major, Francois; Turner, Douglas. "NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions." RNA 17, 1664-1677 (2011).
Assembly members:
RNA_(5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3'), polymer, 11 residues, 3522.178 Da.
RNA_(5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3'), polymer, 11 residues, 3545.218 Da.
Natural source: Common Name: silkworm Taxonomy ID: 7091 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Bombyx mori
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
RNA_(5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3'): GUGAAGCCCGU
RNA_(5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3'): CGGAGGACACU
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 24 |
| 15N chemical shifts | 8 |
| 1H chemical shifts | 156 |
| 31P chemical shifts | 20 |