BMRB Entry 10197
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR10197
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Title: Solution structure of the C2H2 type zinc finger (region 199-231) of human Zinc finger protein 224
Deposition date: 2008-03-05 Original release date: 2009-03-05
Authors: Tomizawa, T.; Tochio, N.; Abe, H.; Saito, K.; Li, H.; Sato, M.; Koshiba, S.; Kobayashi, N.; Kigawa, T.; Yokoyama, S.
Citation: Tochio, N.; Tomizawa, T.; Abe, H.; Saito, K.; Li, H.; Sato, M.; Koshiba, S.; Kobayashi, N.; Kigawa, T.; Yokoyama, S.. "Solution structure of the C2H2 type zinc finger (region 199-231) of human Zinc finger protein 224" . ., .-..
Assembly members:
zf-C2H2, UNP residues 199-231, polymer, 46 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: cell free synthesis
Entity Sequences (FASTA):
zf-C2H2, UNP residues 199-231: GSSGSSGMGEKCYKCDVCGK
EFSQSSHLQTHQRVHTGEKP
SGPSSG
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 154 |
| 15N chemical shifts | 32 |
| 1H chemical shifts | 224 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | zf-C2H2, UNP residues 199-231 | 1 |
| 2 | ZINC ION | 2 |
Entities:
Entity 1, zf-C2H2, UNP residues 199-231 46 residues - Formula weight is not available
| 1 | GLY | SER | SER | GLY | SER | SER | GLY | MET | GLY | GLU | ||||
| 2 | LYS | CYS | TYR | LYS | CYS | ASP | VAL | CYS | GLY | LYS | ||||
| 3 | GLU | PHE | SER | GLN | SER | SER | HIS | LEU | GLN | THR | ||||
| 4 | HIS | GLN | ARG | VAL | HIS | THR | GLY | GLU | LYS | PRO | ||||
| 5 | SER | GLY | PRO | SER | SER | GLY |
Entity 2, ZINC ION - Zn - 65.409 Da.
| 1 | ZN |
Samples:
sample_1: zf-C2H2, UNP residues 199-231, [U-13C; U-15N], 1.0 ± 0.1 mM; d-Tris-HCl 20 mM; NaCl 100 mM; ZnCl2 0.05 mM; IDA 1 mM; d-DTT 1 mM; NaN3 0.02%; D2O 10%; H2O 90%
condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D 13C-separated NOESY | sample_1 | isotropic | condition_1 |
| 3D 15N-separated NOESY | sample_1 | isotropic | condition_1 |
Software:
xwinnmr v3.5, Bruker - collection
NMRPipe v20030801, Delaglio, F. - processing
NMRView v5.0.4, Johnson, B.A. - data analysis
Kujira v0.9820, Kobayashi, N. - data analysis
CYANA v2.0.17, Guntert, P. - refinement, structure solution
NMR spectrometers:
- Bruker AVANCE 800 MHz
Download simulated HSQC data in one of the following formats:
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